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Database pulls

Pull underlying data for indicators

get_commercial_data()
Get commercial data set to store somewhere
get_recreational_data()
Pulls recreational HMS data from MRIP
get_survey_data()
Get survey data using survdat

Commercial fishing indicators

Indicators that use commercial fishing data

create_bennet()
create the bennet indicator
create_comdat()
Create data for ecodata::comdat
create_stock_status()
Creates the stock status data frame for the SOE

Survey based indicators

Indicators that use independent survey data

create_survey_shannon()
Calculates survey_shannon diversity index for automated workflow
create_aggregate_biomass()
Calculates aggregate_biomass data set for automated workflow
create_condition()
Create species condition indicator
create_exp_n()
Calculates expected number of species for automated workflow
create_mass_inshore_survey()
Function to process Massachusetts inshore bottom trawl survey for automated workflow
create_productivity_anomaly()
Calculate Productivity Anomalies from Survey Data
create_species_dist()
Species distribution on the NES.

Recreational fishing indicators

Indicators that use recreational fishing data

create_rec_hms()
Creates recreational HMS indicator

Oceanographic indicators

Indicators that use oceanographic or environmental data

create_heatwave()
Calculates the heatwave indicator
create_heatwave_year()
Calculates the heatwave_year indicator
create_trans_dates()
Calculates trans_dates data set for automated workflow

Supporting data

epu_strata
Bottom Trawl Survey Strata and associated EPUs