Calculates survey_shannon diversity index for automated workflow

This uses the survdat data pull from the survey package. It is formatted exactly like the ecodata data object This calculates the shannon diversity at the station level (by year, cruise etc) Then takes the mean of the shannon indices for each year

Usage

create_survey_shannon(inputPathAlbatross, inputPathBigelow)

Arguments

inputPathAlbatross

Character string. Full path to the Albatross data pull rds file

inputPathBigelow

Character string. Full path to the Bigelow data pull rds file

Value

ecodata::survey_shannon data frame

Examples

if (FALSE) { # \dontrun{
# create the ecodata::survey_shannon indicator
create_aggregate_biomass(inputPathAlbatros = "path/to/albatross.rds",
                         inputPathBigelow = "path/to/bigelow.rds")

} # }