Package index • NEesp2

NEesp2 Functions

Functions to create Northeast ESPS

Create indicators

create_chl(): Create Chlorophyll-a Indicator

create_coldpool_extent(): Create Cold Pool Extent

create_coldpool_index(): Create Cold Pool Index

create_coldpool_persistence(): Create Cold Pool Persistence

create_gsi(): Create Gulf stream Index

create_prop_sp_trips(): Create MRIP species recreational effort indicator

create_rec_trips(): Create MRIP total recreational trips indicator

create_spatial_indicator(): Create Spatial Indicator

create_sst(): Create Sea Surface Temperature Indicator

create_stratified_mean(): Calculate Stratified Mean Biomass

create_swept_area(): Calculate Swept Area Biomass

create_template(): Create an ESP template

create_total_rec_catch(): Create MRIP total recreational catch indicator

create_total_rec_landings(): Create MRIP recreational landings indicator

create_wcr(): Create Warm Core Rings

species_condition(): Create species condition indicator

species_condition_orig(): Create species condition indicator

species_range(): Calculate Species Range

Data visualization

Plot indicators

plot_condition(): Plot Condition

plot_risk(): Plot Risk Assessment summary

plt_indicator(): Plot indicator time series

Create tables

rpt_card_table(): Create a flextable with inset indicator time series plots

Other functions

find_files(): Locate files containing a text string

format_tbl_data(): Format data from report card spreadsheet

groupby_state(): Utility function to group by

nc_to_raster(): Convert netcdf to raster